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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ribiosNGS" in publications use:'
type: software
license: GPL-3.0-only
title: 'ribiosNGS: Differential gene expression analysis for next-generation sequencing
  data in the ''ribios'' suite'
version: 1.0.0
doi: 10.32614/CRAN.package.ribiosNGS
abstract: Provides a comprehensive workflow for differential gene expression analysis
  of RNA-seq data using 'edgeR' and 'limma'-voom pipelines. The package supports count
  filtering, normalization, surrogate variable analysis, batch correction, and visualization
  including volcano plots, smear plots, and PCA. It integrates with the 'ribios' suite
  of packages and is designed for reproducible bioinformatics analyses.
authors:
- family-names: Zhang
  given-names: Jitao David
  email: jitao_david.zhang@roche.com
  orcid: https://orcid.org/0000-0002-3085-0909
repository: https://bedapub.r-universe.dev
repository-code: https://github.com/bedapub/ribiosNGS
commit: 90513e37c7ab00a23dff38258a29b2e7e4589443
url: https://github.com/bedapub/ribiosNGS
date-released: '2026-02-15'
contact:
- family-names: Zhang
  given-names: Jitao David
  email: jitao_david.zhang@roche.com
  orcid: https://orcid.org/0000-0002-3085-0909